Module GENE-422-522 references

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References

  1. Farquharson, R.J., G.R. Griffith, S.A. Barwick and R.G. Banks. 2002, ‘Estimating returns from investment into beef cattle genetic technologies in Australia’, Proceedings 7th World Congress On Genetics Applied to Livestock Production, Communic. No 02-34.
  2. Hoste, C.H. 2002, ‘Research and Development challenges for animal breeding programs in developing countries’, Proceedings 7th World Congress On Genetics Applied to Livestock Production, Communic. No PS-02.
  3. Lewis, R.M. and G. Simm. 2002, Small Ruminant breeding programs for meat: progress and prospects, Proceedings 7th World Congress On Genetics Applied to Livestock Production, Communic. No 02-01.
  4. Miller, S.P. 2002, ‘Beef cattle breeding programmes: progress and prospects’,  Proceedings 7th World Congress On Genetics Applied to Livestock Production, Communic. No 02-18.
  5. Simm, G. 2000, ‘What affects response to selection within breeds?’, Chapter 4 in Genetic improvement of cattle and sheep, Farming Press, Miller Freeman, UK, pp. 107-146.
  6. Simm, G. 2000, ‘Predicting Breeding Values’, in Genetic Improvement of Cattle and Sheep, Farming Press, Miller Freeman, UK, pp. 148-158.
  7. Simm, G. 2000, ‘Selection Indexes’, in Genetic improvement of cattle and sheep, Farming Press, Miller Freeman, UK, pp. 158-165
  8. Simm, G. 2000, ‘BLUP’, in Genetic improvement of cattle and sheep, Farming Press, Miller Freeman, UK, pp. 165-182
  9. Pollak, E.J., J. van der Werf, and R.L. Quaas. 1984, ‘Selection bias and multiple trait evaluation’, Journal of Dairy Science, vol. 67, p. 1590.
  10. Thompson, R. and Meyer, K. 1986, ‘Theoretical aspects in the estimation of breeding values for multi-trait selection’, Livestock Production Science, vol. 15, pp. 299-313.
  11. Gilmour, A.R., Luff, A.F., Fogarty, N.M. and Banks, R. 1994, ‘Genetic parameters for ultrasound fat depth and eye muscle measurements in live Poll Dorset sheep’, Australian Journal of Agricultural Research, vol. 45, pp. 1281-1291.
  12. Meyer, K. 1989, ‘Estimation of genetic parameters’, Chapter 23 in Evolution and Animal Breeding: Reviews on Molecular and Quantitative Approaches in Honour of A. Robertson., eds W.G. Hill and T.F.M. McKay, Oxford University Press, Oxford, pp. 161-167.
  13. Safari, A. and Fogarty, N.M. 2003, ‘Genetic Parameters for Sheep Production Traits: Estimates from the Literature’, Technical Bulletin 49, NSW Agriculture, Orange, Australia.
  14. Thompson, R. 2002 ‘A review of genetic parameter estimation’, Proceedings 7th World Congress On Genetics Applied to Livestock Production, Communication No 17-01.
  15. Brown, T.A. 1999, ‘What is a genome?’ in Genomes, BIOS Scientific Publishers Ltd, pp. 3-11.
  16. Cottle, D.J., Bryson, W.G. and Aitken, G.D. 2002, ‘A review of markers for wool and sheep carcase quality traits’, Wool Technology and Sheep Breeding, vol. 50, pp. 401-409.
  17. Hartl, D.L. and Jones, E.W. 2004, ‘DNA structure and DNA manipulation’, in Genetics: Analysis of Genes and Genomes, Jones and Bartlett, Sudbury, MA, pp. 36-85.
  18. Maddox, J.F., Davies, K.P., Crawford, A.M, Hulme, D.J., Vaiman, D., Cribiu, E.P., Freking, B.A., Beh, K.J., Cockett, N.E., Kang, N., Riffkin, C.D., Drinkwater, R., Moore, S.S., Dodds, K.G., Lumsden, J.M., van Stijn, T.C., Phua, S.H.,  Adelson, D.L., Burkin, H.R., Broom, J.E., Buitkamp, J., Cambridge, L., Cushwa, W.T., Gerard, E., Galloway, S.M., Harrison, B., Hawken, R.J., Hiendleder, S., Henry, H.M., Medrano, J.F., Paterson, K.A., Schibler, L., Stone, R.T. and van Hest, B. 2001, ‘An enhanced linkage map of the sheep genome comprising more than 1000 loci’, Genome Research, vol. 11(7), pp. 1275-1289.
  19. Weller, J. I. 2001, ‘Genetic mapping functions’, in Quantitative trait loci analysis in animals, CAB International, New York, pp. 9-12.
  20. Van der Werf, J., Kinghorn, B., Hayes, B. and Goddard, M. 2003, ‘Estimation of recombination fraction’, ‘ML estimation of linkage’ and ‘testing for linkage: LOD scores’, in QTL mapping for practitioners, from linkage to genes pp. 15-20.
  21. Andersson, L. and Georges, M. 2004, ‘Domestic-animal genomics: deciphering the genetics of complex traits’, Nature Reviews Genetics, vol. 5, pp. 202-212.
  22. Doerge, R.W. 2002, ‘Mapping and analysis of quantitative trait loci in experimental populations’, Nature Reviews Genetics, vol. 3, pp. 43-52.
  23. Hackett, C.A. 2002, ‘Statistical methods for QTL mapping in cereals’, Plant Molecular Biology, vol. 48, pp. 585-599.
  24. Dekkers, J.C. and Hospital, F. 2002, ‘The use of molecular genetics in the improvement of agricultural populations’, Nature Reviews Genetics, vol. 3, pp. 22-32.
  25. Haley, C. and Visscher, P. 1990, ‘DNA markers and genetic testing in farm animal improvement: current applications and future prospects’, Roslin Institute Annual Report 1989-90, pp. 28-39.
  26. Kinghorn, B., van Arendonk, J. and Hetzel, J. 1994, ‘Detection and use of major genes in animal breeding’, AgBiotech News and Information, vol. 6, pp. 297N-302N.
  27. Crawford, A.M. 2003, ‘The use of genetic modification technologies in the discovery of genes affecting production traits and disease resistance in animals’, New Zealand Veterinary Journal, vol. 51, pp. 52-57. (General overview of gene discovery for quantitative traits, New Zealand focus).
  28. Grisart, B., Coppieters, W., Farnir, F., Karim, L., Ford, C., Berzi, P., Cambisano, N., Mni, M., Reid, S., Simon, P., Spelman, R., Georges, M. and Snell, R. 2002, ‘Positional candidate cloning of a QTL in dairy cattle: identification of a missense mutation in the bovine DGAT1 gene with major effects on milk yield and composition’, Genome Research, vol. 12, pp. 222-231.
  29. Rothschild, M.F. 2003, ‘Advances in pig genomics and functional gene discovery’, Comparative and Functional Genomics, vol. 4, pp. 266-270. (Pig as a livestock example).
  30. Gibson, J.P. and Dekkers, J.C.M. 2003, ‘Deriving Economic Weights’, Chapter 7, in Design and Economics of Animal Breeding Strategies pp.7-1 – 7-57
  31. Gibson, J.P. Unpublished, ‘Calculus Refresher Notes’.
  32. Ponzoni, R.W., James, J.W. and Ingham, V.M. 2001, ‘Accounting for the effect of increasing twinning rate in ewe wool production in the breeding objective for Merino sheep’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 14, pp. 421-424.
  33. Purvis, I.W. and Swan, A.A. 1999, ‘Incorporating assessed style, length, and strength into breeding objectives for fine and superfine merino flocks’,  Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 13, pp. 177-180.
  34. Smith, J.L. and Purvis, I.W. 2003, ‘Breeding strategies to meet the specifications of fine wool markets’,  Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 15, pp. 281-285.
  35. Kadarmideen, H.N. and G. Simm. 2002, ‘Selection responses expected from index selection including disease resistance, fertility and longevity in dairy cattle’, Proceedings 7th World Congress On Genetics Applied to Livestock Production, Communication No 01-19.
  36. Saboulard, M., Russell, W.C. and Riley, M.L. 1995, ‘Selection for lambing rate and clean fleece weight in sheep’, Journal of Animal Science, vol. 73(11), pp. 3195-3198.
  37. Smith, J.L., Purvis, I.W. and Swan, A.A. 2002, ‘Predicted response to multiple trait selection when crimp frequency is included in a breeding objective for Merino sheep’, Proceedings 7th World Congress On Genetics Applied to Livestock Production, Communication No 12-06.
  38. Kinghorn, B.P. 2000, ‘Key issues in breeding program design’, Chapter 11 in Animal Breeding – Use of New Technologies, Kinghorn, B.P., van der Werf, J.H.J. and Ryan, M. (eds.), The Post Graduate Foundation in Veterinarian Science of the University of Sydney, pp. 141.  ISBN 0 646 38713 8.
  39. Kinghorn, B.P. 2000, ‘Nucleus breeding schemes’, Chapter 12 in Animal Breeding – Use of New Technologies, Kinghorn, B.P., van der Werf, J.H.J. and Ryan, M. (eds.), The Post Graduate Foundation in Veterinarian Science of the University of Sydney,  pp. 151. ISBN 0 646 38713 8.
  40. Mortimer, R. 1999, ‘Centre Plus, Breeding for the Customer of the 21st Century’,  Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 13, pp. 90-93.
  41. van der Werf, J. 2000, ‘Design of dairy breeding programs’, Chapter 13 in Animal Breeding – Use of New Technologies, Kinghorn, B.P., van der Werf, J.H.J. and Ryan, M. (eds.), The Post Graduate Foundation in Veterinarian Science of the University of Sydney, pp. 159.  ISBN 0 646 38713 8.
  42. D’Occhio, M.J. 2000, ‘The evolution of cloning in livestock species’, Chapter 17 in Animal Breeding – Use of New Technologies, B.P. Kinghorn, J.H.J. van der Werf and M. Ryan, eds, The Post Graduate Foundation in Veterinarian Science of the University of Sydney, p. 213.  ISBN 0 646 38713 8.
  43. D’Occhio, M.J. 2000, ‘Sexing of sperm and embryos: use of sexed sperm in AI, IVF, ICSI and Graft’, Chapter 19 in Animal Breeding – Use of New Technologies, B.P. Kinghorn, J.H.J. van der Werf and M. Ryan, eds, The Post Graduate Foundation in Veterinarian Science of the University of Sydney, p. 247. ISBN 0 646 38713 8.
  44. Kinghorn, B.P. 2000, ‘Reproductive technology and designs to exploit it’,  Chapter 16 in Animal Breeding – Use of New Technologies, B.P. Kinghorn, J.H.J. van der Werf and M. Ryan, eds, The Post Graduate Foundation in Veterinarian Science of the University of Sydney, p. 199.  ISBN 0 646 38713 8.
  45. Kinghorn, B.P. 2000, ‘Animal production and breeding systems to exploit cloning technology’,  Chapter 18 in Animal Breeding – Use of New Technologies, B.P. Kinghorn, J.H.J. van der Werf and M. Ryan, eds, The Post Graduate Foundation in Veterinarian Science of the University of Sydney, p. 237. ISBN 0 646 38713 8.
  46. Van Vleck, L. D. 1999, ‘Breeding and Genetics 3: Implications of Cloning for Breed Improvement Strategies: Are Traditional Methods of Animal Improvement Obsolete?’, Journal of Animal Science. vol. 77, suppl. 2/Journal of Dairy Science, vol. 82, suppl. 2.
  47. van der Werf, J. 2000, ‘Inbreeding and the effects of increased prolificacy’, Chapter 15 in Animal Breeding – Use of New Technologies, B.P. Kinghorn, J.H.J. van der Werf and M. Ryan, eds, The Post Graduate Foundation in Veterinarian Science of the University of Sydney, pp. 187. ISBN 0 646 38713 8.
  48. Kinghorn, B.P. 1987, ‘Crossbreeding in domestic animals’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 6, pp. 112-123.
  49. Kinghorn, B.P. 2000, ‘The genetic basis of crossbreeding’, Chapter 4 in Animal Breeding – Use of New Technologies, Kinghorn, B.P., van der Werf, J.H.J. and Ryan, M. (eds.), The Post Graduate Foundation in Veterinarian Science of the University of Sydney, pp. 35. ISBN 0 646 38713 8.
  50. Kinghorn, B.P. 2000, ‘The tactical approach to implementing breeding programs’, Chapter 22 in Animal Breeding – use of new technologies, B.P. Kinghorn, J.H.J. van der Werf and M. Ryan, eds, University of Sydney Veterinary Post Graduate Foundation, p. 291. ISBN 0 646 38713 8
  51. Kinghorn, B.P., Meszaros S.A. and Vagg, R.D. 2002, ‘Dynamic tactical decision systems for animal breeding’, Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, vol. 33, p. 179-186.
  52. Arthur, P.F., Archer, J.A. and Herd, R.M. 2004, ‘Feed intake and efficiency in beef cattle: overview of recent Australian research and challenges for the future’, Australian Journal of Experimental Agriculture, vol. 44, pp. 361-369.
  53. Brien, F.D., Jaensch, K.S., Hebart, M.L., Kemper, K.E., Grimson, R.J. and Smith, D.H. 2005a, ‘Merino Selection Demonstration Flocks: 2003-drop hogget results and progress to date’ in Merino Selection Demonstration Flocks, Newsletter Number 9, April 2005, pp. 4-26.
  54. Brien, F.D., Kemper, K.E., Hebart, M.L., Jaensch, K.S., Grimson, R.J. and Smith, D.H. 2005b, ‘Genetic Trends’ in Merino Selection Demonstration Flocks, Newsletter Number 9, April 2005, pp. 41-45.
  55. Casey, A.E. and Atkins, K.D. 1999, ‘Merino Benchmark – developing on-stud across-flock performance evaluation’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 13, pp. 165-168.
  56. Davis, G.H. 2004, ‘Fecundity genes in sheep’, Animal Reproduction Science, vol. 82-83, pp. 247-253.
  57. Greeff, J.C., Karlsson, L.J.E. and Harris, J.F. 1995, ‘Heritability of faecal worm egg count at different times of the year in a Mediterranean environment’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 11, pp. 117-121.
  58. Lee, G.J., Atkins, K.D. and Swan, A.A. 2002, ‘Pasture intake and digestibility by young and non-breeding adult sheep: the extent of genetic variation and relationships with productivity’, Livestock Production Science, vol. 73, pp. 185-198.
  59. Li, Y., Swan, A.A. and Purvis, I.W. 1999, ‘Genetic variation in resistance to fleece rot in CSIRO’s fine wool flock’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 13, pp. 524-527.
  60. Safari, E., Fogarty, N.M. and Gilmour, A.R. 2005, ‘A review of genetic parameter estimates for wool, growth, meat and reproduction traits in sheep’, Livestock Production Science, vol. 92, pp. 271-289.
  61. Swan, A.A., Piper, L.R., Brewer, H.G. and Purvis, I.W. 2001, ‘Genetic variation in reproductive performance of fine wool Merinos’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 14, pp. 417-420.
  62. Graser, H.U., Goddard, M.E. and Allen, J. 1995, ‘Better genetic technology for the beef industry’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 11, pp. 56-64.
  63. Parnell, P. undated, ‘The Genomic Revolution – what will it offer the beef industry’, Beef CRC Genetics CD.
  64. Upton, W.H., Meszaros, S.A., Barwick, S.A. and Kinghorn, B.P. 2001, ‘Mate allocations in beef cattle herds’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, Queenstown, NZ,vol. 14, pp. 457- 460
  65. Notter, D.R. 2004, ‘Multiple trait selection in a single gene world’, Beef Improvement Federation Conference Proceedings, pp. 26-31.
  66. Banks, R.G. and Kinghorn, B.P. 1997, ‘Effectiveness of national genetic improvement programs – a comparison of challenges across industries’, Proceedings of the Association for the Advancement of Animal Breeding and Genetics, vol. 12, pp. 20-30.

 

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